Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | EJI01_04130 | Not Available | Positive | 860084 - 863101 | 110665.0 |
| hypothetical protein | EJI01_04135 | Not Available | Positive | 863385 - 863651 | 9736.5 |
| duf1488 family protein | EJI01_04140 | Not Available | Positive | 863626 - 863892 | 10055.6 |
| f0f1 atp synthase subunit c | EJI01_04145 | Not Available | Positive | 864024 - 864269 | 8209.16 |
| dmt family transporter | EJI01_04150 | Not Available | Positive | 864294 - 865193 | 32845.4 |
| tetratricopeptide repeat protein | EJI01_04155 | Not Available | Negative | 865180 - 866496 | 47590.7 |
| helix-turn-helix domain-containing protein | EJI01_04160 | Not Available | Positive | 866593 - 867642 | 37420.2 |
| acyl-coa thioesterase ii | EJI01_04165 | Not Available | Negative | 867658 - 868575 | 33395.8 |
| fad-dependent oxidoreductase | EJI01_04170 | Not Available | Negative | 868727 - 870076 | 47929.2 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_04175 | Not Available | Negative | 870196 - 871158 | 33790.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
