Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | EJI01_04080 | Not Available | Negative | 851190 - 852320 | 38791.0 |
| response regulator transcription factor | EJI01_04085 | Not Available | Positive | 852477 - 853205 | 27858.8 |
| duf4019 domain-containing protein | EJI01_04090 | Not Available | Positive | 853240 - 853674 | 15879.0 |
| nudix hydrolase | EJI01_04095 | Not Available | Positive | 853745 - 854230 | 17669.2 |
| trna 2-thiouridine(34) synthase mnma | EJI01_04100 | Not Available | Negative | 854227 - 855336 | 40442.7 |
| wax ester/triacylglycerol synthase family o-acyltransferase | EJI01_04105 | Not Available | Positive | 855531 - 857123 | 55966.1 |
| llm class flavin-dependent oxidoreductase | EJI01_04110 | Not Available | Negative | 857125 - 858105 | 35486.4 |
| hypothetical protein | EJI01_04115 | Not Available | Positive | 858244 - 858432 | 6313.82 |
| hypothetical protein | EJI01_04120 | Not Available | Positive | 858426 - 859112 | 24689.8 |
| single-stranded dna-binding protein | EJI01_04125 | Not Available | Negative | 859412 - 859924 | 18373.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
