Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol kinase | EJI01_00365 | Not Available | Negative | 78801 - 79199 | 14330.5 |
| rdd family protein | EJI01_00370 | Not Available | Negative | 79196 - 79759 | 21181.2 |
| duf3106 domain-containing protein | EJI01_00375 | Not Available | Negative | 79772 - 80578 | 28697.5 |
| duf3619 family protein | EJI01_00380 | Not Available | Negative | 80595 - 81020 | 15145.1 |
| rna polymerase sigma factor | EJI01_00385 | Not Available | Negative | 81017 - 81583 | 21443.3 |
| acetolactate synthase 3 catalytic subunit | EJI01_00390 | Not Available | Positive | 81869 - 83644 | 65151.8 |
| acetolactate synthase small subunit | EJI01_00395 | Not Available | Positive | 83773 - 84264 | 18015.9 |
| ketol-acid reductoisomerase | EJI01_00400 | Not Available | Positive | 84313 - 85329 | 36723.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | EJI01_00405 | Not Available | Positive | 85418 - 86242 | 30111.8 |
| 2-isopropylmalate synthase | EJI01_00410 | Not Available | Positive | 86423 - 88126 | 62968.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
