Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | EJI01_03870 | Not Available | Positive | 806954 - 807694 | 26684.9 |
| abc transporter substrate-binding protein | EJI01_03875 | Not Available | Negative | 807700 - 808653 | 33191.2 |
| histidinol-phosphate transaminase | EJI01_03880 | Not Available | Negative | 808682 - 809677 | 35222.2 |
| malate synthase g | EJI01_03885 | Not Available | Positive | 809883 - 812057 | 77801.4 |
| prop effector | EJI01_03895 | Not Available | Negative | 812733 - 813425 | 25619.7 |
| l,d-transpeptidase | EJI01_03905 | Not Available | Positive | 813946 - 814593 | 23099.5 |
| lysr family transcriptional regulator | EJI01_03910 | Not Available | Negative | 814597 - 815529 | 34056.2 |
| duf2917 domain-containing protein | EJI01_03915 | Not Available | Positive | 815612 - 815923 | 11386.6 |
| acetyl-coa c-acyltransferase | EJI01_03920 | Not Available | Positive | 816056 - 817234 | 40893.6 |
| enoyl-coa hydratase | EJI01_03925 | Not Available | Positive | 817234 - 818034 | 28920.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
