Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyisoprenoid-binding protein | EJI01_03770 | Not Available | Positive | 787108 - 787752 | 23229.1 |
| hypothetical protein | EJI01_03775 | Not Available | Negative | 787733 - 788794 | 38551.5 |
| hypothetical protein | EJI01_03780 | Not Available | Positive | 788962 - 789333 | 14511.0 |
| phospholipase d family protein | EJI01_03785 | Not Available | Negative | 789340 - 790965 | 60242.7 |
| rna polymerase factor sigma-54 | EJI01_03790 | Not Available | Negative | 790998 - 792578 | 57832.4 |
| lps export abc transporter atp-binding protein | EJI01_03795 | Not Available | Negative | 792597 - 793373 | 28385.4 |
| lipopolysaccharide transport periplasmic protein lpta | EJI01_03800 | Not Available | Negative | 793370 - 794047 | 23855.3 |
| thiol:disulfide interchange protein dsba/dsbl | EJI01_03805 | Not Available | Negative | 794171 - 794815 | 23989.6 |
| sporulation protein | EJI01_03810 | Not Available | Negative | 794900 - 795619 | 25010.8 |
| arginine--trna ligase | EJI01_03815 | Not Available | Negative | 795629 - 797302 | 61018.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
