Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacid dehydrogenase | EJI01_03515 | Not Available | Negative | 734926 - 735924 | 35231.6 |
| hypothetical protein | EJI01_03520 | Not Available | Negative | 736018 - 736302 | 9671.66 |
| response regulator | EJI01_03525 | Not Available | Negative | 736335 - 737015 | 25386.4 |
| hamp domain-containing protein | EJI01_03530 | Not Available | Negative | 737012 - 738559 | 56529.2 |
| porin | EJI01_03535 | Not Available | Negative | 738617 - 739774 | 40283.4 |
| hamp domain-containing histidine kinase | EJI01_03540 | Not Available | Negative | 739771 - 740697 | 32932.7 |
| succinylglutamate desuccinylase | EJI01_03545 | Not Available | Negative | 740777 - 741778 | 36211.0 |
| hypothetical protein | EJI01_03550 | Not Available | Positive | 741860 - 742123 | 9311.67 |
| ribulose-phosphate 3-epimerase | EJI01_03555 | Not Available | Negative | 742113 - 742808 | 24461.3 |
| co2+/mg2+ efflux protein apag | EJI01_03560 | Not Available | Positive | 742848 - 743243 | 14341.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
