Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_00305 | Not Available | Positive | 67369 - 67602 | 8209.02 |
| hypothetical protein | EJI01_00310 | Not Available | Positive | 67784 - 68353 | 21077.2 |
| sodium-translocating pyrophosphatase | EJI01_00315 | Not Available | Negative | 68390 - 70879 | 84236.3 |
| inorganic diphosphatase | EJI01_00320 | Not Available | Positive | 71138 - 71665 | 19459.7 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_00325 | Not Available | Negative | 71685 - 72656 | 33206.5 |
| m20 peptidase family dipeptidase | EJI01_00330 | Not Available | Negative | 72653 - 74089 | 51217.7 |
| lysr family transcriptional regulator | EJI01_00335 | Not Available | Positive | 74204 - 75145 | 33782.2 |
| dmt family transporter | EJI01_00350 | Not Available | Negative | 76641 - 77576 | 33265.9 |
| p-ii family nitrogen regulator | EJI01_00355 | Not Available | Positive | 77827 - 78165 | 12277.9 |
| tigr00730 family rossman fold protein | EJI01_00360 | Not Available | Negative | 78170 - 78760 | 21288.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
