Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus modification protein pilv | EJI01_03155 | Not Available | Negative | 664799 - 665350 | 19608.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EJI01_03160 | Not Available | Negative | 665347 - 665934 | 20707.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EJI01_03165 | Not Available | Positive | 666127 - 667245 | 39562.4 |
| riboflavin synthase | EJI01_03170 | Not Available | Positive | 667290 - 667943 | 22493.8 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | EJI01_03175 | Not Available | Positive | 667940 - 669100 | 40976.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | EJI01_03180 | Not Available | Positive | 669132 - 669596 | 16373.6 |
| transcription antitermination factor nusb | EJI01_03185 | Not Available | Positive | 669593 - 670126 | 19276.7 |
| pyridoxal phosphate-dependent aminotransferase | EJI01_03190 | Not Available | Positive | 670123 - 671400 | 46250.0 |
| tol-pal system-associated acyl-coa thioesterase | EJI01_03195 | Not Available | Positive | 671397 - 671861 | 17011.5 |
| protein tolq | EJI01_03200 | Not Available | Positive | 671858 - 672571 | 25851.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
