Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | EJI01_03055 | Not Available | Negative | 641935 - 643203 | 45482.5 |
| trna lysidine(34) synthetase tils | EJI01_03060 | Not Available | Negative | 643288 - 644238 | 34029.6 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | EJI01_03065 | Not Available | Negative | 644271 - 645251 | 36459.6 |
| dna-3-methyladenine glycosylase 2 family protein | EJI01_03070 | Not Available | Negative | 645267 - 645917 | 24259.3 |
| cysteine--trna ligase | EJI01_03075 | Not Available | Negative | 645935 - 647311 | 50849.5 |
| tetratricopeptide repeat protein | EJI01_03080 | Not Available | Positive | 647504 - 648085 | 20775.1 |
| peptidyl-prolyl cis-trans isomerase | EJI01_03085 | Not Available | Positive | 648156 - 648728 | 20341.3 |
| peptidyl-prolyl cis-trans isomerase | EJI01_03090 | Not Available | Positive | 648746 - 649255 | 18327.7 |
| udp-2,3-diacylglucosamine diphosphatase | EJI01_03095 | Not Available | Positive | 649263 - 650024 | 27964.1 |
| zinc-dependent peptidase | EJI01_03100 | Not Available | Positive | 650024 - 650809 | 28719.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
