Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EJI01_03005 | Not Available | Negative | 633431 - 634201 | 27095.6 |
| iclr family transcriptional regulator | EJI01_03010 | Not Available | Negative | 634198 - 635070 | 31731.5 |
| c4-dicarboxylate abc transporter | EJI01_03015 | Not Available | Positive | 635151 - 636134 | 36623.2 |
| trap transporter small permease subunit | EJI01_03020 | Not Available | Positive | 636148 - 636639 | 18189.7 |
| trap transporter large permease subunit | EJI01_03025 | Not Available | Positive | 636633 - 637919 | 45017.9 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_03030 | Not Available | Negative | 637941 - 638915 | 34029.3 |
| lytic murein transglycosylase | EJI01_03035 | Not Available | Positive | 639030 - 640307 | 45455.6 |
| pa2169 family four-helix-bundle protein | EJI01_03040 | Not Available | Negative | 640358 - 640828 | 17136.2 |
| hypothetical protein | EJI01_03045 | Not Available | Positive | 641203 - 641727 | 17965.7 |
| Trna-ser | Not Available | Not Available | Positive | 641820 - 641912 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
