Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zip family metal transporter | EJI01_00255 | Not Available | Positive | 55104 - 56012 | 30536.0 |
| aldehyde dehydrogenase family protein | EJI01_00260 | Not Available | Negative | 56020 - 57453 | 51304.1 |
| duf4214 domain-containing protein | EJI01_00265 | Not Available | Positive | 57652 - 59220 | 55031.3 |
| type i secretion system permease/atpase | EJI01_00270 | Not Available | Positive | 59276 - 61654 | 85976.4 |
| hlyd family type i secretion periplasmic adaptor subunit | EJI01_00275 | Not Available | Positive | 61651 - 63078 | 51290.6 |
| peroxiredoxin | EJI01_00280 | Not Available | Negative | 63082 - 63636 | 19745.7 |
| phospholipase d family protein | EJI01_00285 | Not Available | Positive | 63753 - 65327 | 57601.7 |
| desaturase | EJI01_00290 | Not Available | Positive | 65337 - 66122 | 29780.2 |
| hypothetical protein | EJI01_00295 | Not Available | Positive | 66119 - 67000 | 33233.6 |
| hypothetical protein | EJI01_00300 | Not Available | Positive | 67020 - 67382 | 12922.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
