Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_02955 | Not Available | Negative | 624597 - 624716 | 4373.49 |
| tripartite tricarboxylate transporter permease | EJI01_02960 | Not Available | Negative | 624841 - 626361 | 52580.7 |
| tripartite tricarboxylate transporter tctb family protein | EJI01_02965 | Not Available | Negative | 626443 - 627003 | 19512.8 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_02970 | Not Available | Negative | 627086 - 628045 | 33090.1 |
| response regulator transcription factor | EJI01_02975 | Not Available | Positive | 628147 - 628827 | 24852.3 |
| sensor histidine kinase | EJI01_02980 | Not Available | Positive | 628824 - 630236 | 51523.5 |
| rna-binding s4 domain-containing protein | EJI01_02985 | Not Available | Positive | 630242 - 630667 | 15883.8 |
| polyphosphate kinase 2 family protein | EJI01_02990 | Not Available | Positive | 630717 - 631523 | 30936.1 |
| fad-dependent oxidoreductase | EJI01_02995 | Not Available | Positive | 631873 - 633129 | 44822.4 |
| hypothetical protein | EJI01_03000 | Not Available | Negative | 633202 - 633384 | 6310.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
