Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EJI01_02905 | Not Available | Negative | 611412 - 612608 | 43029.9 |
| pas domain-containing protein | EJI01_02910 | Not Available | Negative | 612759 - 614282 | 54843.1 |
| efflux transporter outer membrane subunit | EJI01_02915 | Not Available | Positive | 614519 - 616000 | 51477.4 |
| efflux rnd transporter periplasmic adaptor subunit | EJI01_02920 | Not Available | Positive | 615997 - 617148 | 40017.0 |
| efflux rnd transporter permease subunit | EJI01_02925 | Not Available | Positive | 617145 - 620270 | 111647.0 |
| hypothetical protein | EJI01_02930 | Not Available | Positive | 620310 - 620675 | 12070.4 |
| hypothetical protein | EJI01_02935 | Not Available | Negative | 620715 - 621500 | 28217.0 |
| hypothetical protein | EJI01_02940 | Not Available | Negative | 621646 - 622599 | 35637.8 |
| alpha/beta fold hydrolase | EJI01_02945 | Not Available | Negative | 622737 - 623807 | 39469.2 |
| trimeric intracellular cation channel family protein | EJI01_02950 | Not Available | Positive | 623922 - 624584 | 23519.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
