Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | EJI01_02805 | Not Available | Negative | 590189 - 593362 | 115761.0 |
| efflux rnd transporter periplasmic adaptor subunit | EJI01_02810 | Not Available | Negative | 593373 - 594539 | 40451.2 |
| squalene synthase hpnc | EJI01_02815 | Not Available | Positive | 594698 - 595621 | 33467.1 |
| squalene synthase hpnd | EJI01_02820 | Not Available | Positive | 595618 - 596457 | 31557.0 |
| fad-dependent oxidoreductase | EJI01_02825 | Not Available | Positive | 596454 - 597728 | 44524.9 |
| sigma-54-dependent fis family transcriptional regulator | EJI01_02830 | Not Available | Negative | 597644 - 599074 | 51462.6 |
| acetate kinase | EJI01_02835 | Not Available | Negative | 599087 - 600388 | 46987.9 |
| hypothetical protein | EJI01_02840 | Not Available | Positive | 600950 - 601954 | 30526.7 |
| hypothetical protein | EJI01_02845 | Not Available | Positive | 602037 - 602384 | 11672.9 |
| peptidase c39 | EJI01_02850 | Not Available | Positive | 602395 - 603075 | 24796.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
