Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | EJI01_28475 | Not Available | Negative | 5877964 - 5878369 | 13869.4 |
| duf1929 domain-containing protein | EJI01_28480 | Not Available | Positive | 5878370 - 5878763 | 14302.0 |
| transposase | EJI01_28485 | Not Available | Negative | 5878764 - 5879132 | 13416.1 |
| is3 family transposase | EJI01_28490 | Not Available | Negative | 5879240 - 5879502 | 10273.3 |
| hypothetical protein | EJI01_28495 | Not Available | Negative | 5879847 - 5880184 | 11865.4 |
| is30 family transposase | EJI01_28500 | Not Available | Negative | 5880511 - 5880821 | 11815.1 |
| is3 family transposase | EJI01_28505 | Not Available | Negative | 5880861 - 5881129 | 9763.38 |
| chemotaxis protein chew | EJI01_28510 | Not Available | Positive | 5881249 - 5881383 | 5132.03 |
| is630 family transposase | EJI01_28515 | Not Available | Negative | 5881384 - 5881635 | 9645.5 |
| is5/is1182 family transposase | EJI01_28520 | Not Available | Negative | 5881780 - 5881885 | 3539.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
