Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | EJI01_28155 | Not Available | Negative | 5821233 - 5821658 | 14846.0 |
| rhs repeat protein | EJI01_28160 | Not Available | Positive | 5822069 - 5824031 | 70057.9 |
| hypothetical protein | EJI01_28165 | Not Available | Positive | 5824197 - 5824628 | 15588.4 |
| hypothetical protein | EJI01_28170 | Not Available | Positive | 5824744 - 5825538 | 30030.4 |
| duf2750 domain-containing protein | EJI01_28175 | Not Available | Negative | 5828289 - 5828669 | 13957.4 |
| hypothetical protein | EJI01_28180 | Not Available | Negative | 5828881 - 5829258 | 13864.5 |
| gfa family protein | EJI01_28185 | Not Available | Negative | 5829813 - 5830286 | 17301.5 |
| is110 family transposase | EJI01_28195 | Not Available | Positive | 5831019 - 5832035 | 37007.2 |
| rhs repeat protein | EJI01_28200 | Not Available | Positive | 5832428 - 5834364 | 69527.0 |
| transposase | EJI01_28205 | Not Available | Positive | 5834432 - 5835982 | 57881.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
