Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_28035 | Not Available | Negative | 5799475 - 5800023 | 20370.4 |
| xre family transcriptional regulator | EJI01_28040 | Not Available | Positive | 5800860 - 5800973 | 3817.79 |
| hypothetical protein | EJI01_28045 | Not Available | Negative | 5800970 - 5801407 | 16129.2 |
| cupin | EJI01_28050 | Not Available | Negative | 5801806 - 5802768 | 35792.6 |
| hypothetical protein | EJI01_28055 | Not Available | Positive | 5803162 - 5803650 | 18308.0 |
| duf1272 domain-containing protein | EJI01_28065 | Not Available | Negative | 5805377 - 5805625 | 8981.7 |
| saccharopine dehydrogenase | EJI01_28070 | Not Available | Positive | 5805803 - 5806930 | 39786.6 |
| duf4166 domain-containing protein | EJI01_28075 | Not Available | Positive | 5806942 - 5807472 | 19695.8 |
| thiol-disulfide oxidoreductase dcc family protein | EJI01_28080 | Not Available | Positive | 5807469 - 5807858 | 14717.0 |
| hypothetical protein | EJI01_28085 | Not Available | Negative | 5807963 - 5808325 | 13283.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
