Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | EJI01_27890 | Not Available | Negative | 5769806 - 5770001 | 6976.37 |
| autotransporter outer membrane beta-barrel domain-containing protein | EJI01_27900 | Not Available | Negative | 5770634 - 5775622 | 162654.0 |
| cupin | EJI01_27905 | Not Available | Negative | 5775937 - 5776905 | 36321.9 |
| hypothetical protein | EJI01_27910 | Not Available | Negative | 5777057 - 5777428 | 12521.0 |
| response regulator transcription factor | EJI01_27915 | Not Available | Positive | 5778055 - 5778744 | 25276.9 |
| hypothetical protein | EJI01_27920 | Not Available | Negative | 5778806 - 5779828 | 35883.2 |
| hypothetical protein | EJI01_27925 | Not Available | Negative | 5780011 - 5780409 | 13851.4 |
| Trna-ile | Not Available | Not Available | Positive | 5783708 - 5783784 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 5783812 - 5783887 | Not Available |
| hypothetical protein | EJI01_27965 | Not Available | Positive | 5788225 - 5788554 | 11459.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
