Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | EJI01_27725 | Not Available | Positive | 5731232 - 5732494 | 45063.0 |
| hypothetical protein | EJI01_27730 | Not Available | Positive | 5732491 - 5733114 | 21623.9 |
| hlyd family efflux transporter periplasmic adaptor subunit | EJI01_27735 | Not Available | Positive | 5733111 - 5734286 | 40590.1 |
| efflux rnd transporter permease subunit | EJI01_27740 | Not Available | Positive | 5734300 - 5737440 | 112216.0 |
| hypothetical protein | EJI01_27745 | Not Available | Positive | 5737550 - 5737924 | 12708.2 |
| hypothetical protein | EJI01_27750 | Not Available | Positive | 5738630 - 5739016 | 14098.4 |
| crp/fnr family transcriptional regulator | EJI01_27755 | Not Available | Positive | 5739434 - 5740162 | 26957.0 |
| hypothetical protein | EJI01_27760 | Not Available | Negative | 5740290 - 5740847 | 20818.9 |
| hypothetical protein | EJI01_27765 | Not Available | Positive | 5741455 - 5741715 | 9337.15 |
| hemerythrin domain-containing protein | EJI01_27770 | Not Available | Negative | 5742181 - 5742765 | 22480.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
