Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase family protein | EJI01_27510 | Not Available | Positive | 5701455 - 5702351 | 32796.1 |
| abc transporter substrate-binding protein | EJI01_27515 | Not Available | Positive | 5702403 - 5703245 | 30267.9 |
| amino acid abc transporter permease | EJI01_27520 | Not Available | Positive | 5703283 - 5704002 | 26404.7 |
| dihydropyrimidinase | EJI01_27525 | Not Available | Positive | 5704016 - 5705470 | 52879.6 |
| gntr family transcriptional regulator | EJI01_27530 | Not Available | Positive | 5705541 - 5706227 | 26019.1 |
| is5 family transposase | EJI01_27535 | Not Available | Positive | 5706453 - 5706975 | 19868.0 |
| gnat family n-acetyltransferase | EJI01_27540 | Not Available | Negative | 5707006 - 5707455 | 16748.0 |
| adhesin | EJI01_27545 | Not Available | Negative | 5707529 - 5707990 | 13287.5 |
| class i sam-dependent methyltransferase | EJI01_27550 | Not Available | Negative | 5708163 - 5708774 | 22467.9 |
| hypothetical protein | EJI01_27555 | Not Available | Negative | 5708838 - 5709128 | 10469.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
