Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease e inhibitor rraa | EJI01_27395 | Not Available | Negative | 5678851 - 5679396 | 19234.3 |
| 3-isopropylmalate dehydratase | EJI01_27400 | Not Available | Positive | 5679598 - 5681565 | 70330.7 |
| crp/fnr family transcriptional regulator | EJI01_27405 | Not Available | Positive | 5681555 - 5682307 | 28511.3 |
| lysr family transcriptional regulator | EJI01_27410 | Not Available | Positive | 5682356 - 5683243 | 32277.2 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_27415 | Not Available | Positive | 5683469 - 5684458 | 34320.7 |
| indolepyruvate ferredoxin oxidoreductase family protein | EJI01_27420 | Not Available | Positive | 5684501 - 5688007 | 125741.0 |
| acetyl-coa c-acyltransferase | EJI01_27425 | Not Available | Positive | 5688017 - 5689201 | 41091.4 |
| hypothetical protein | EJI01_27440 | Not Available | Negative | 5690728 - 5691303 | 19714.9 |
| hypothetical protein | EJI01_27445 | Not Available | Negative | 5691688 - 5691888 | 6914.62 |
| hypothetical protein | EJI01_27450 | Not Available | Positive | 5692335 - 5692562 | 8198.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
