Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EJI01_27240 | Not Available | Positive | 5646884 - 5647948 | 37283.9 |
| aminopeptidase p family protein | EJI01_27245 | Not Available | Positive | 5647988 - 5649169 | 43348.3 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_27250 | Not Available | Positive | 5649323 - 5650291 | 33539.5 |
| hypothetical protein | EJI01_27255 | Not Available | Positive | 5650471 - 5651457 | 35354.7 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_27260 | Not Available | Positive | 5651597 - 5652556 | 33564.8 |
| 2-pyrone-4,6-dicarboxylate hydrolase | EJI01_27265 | Not Available | Positive | 5652678 - 5653517 | 31040.1 |
| hamp domain-containing protein | EJI01_27270 | Not Available | Negative | 5653712 - 5655178 | 52918.1 |
| response regulator | EJI01_27275 | Not Available | Negative | 5655156 - 5655836 | 25178.6 |
| aldo/keto reductase | EJI01_27280 | Not Available | Positive | 5656014 - 5657132 | 40943.1 |
| aldo/keto reductase | EJI01_27285 | Not Available | Positive | 5657180 - 5658358 | 42033.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
