Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease subunit | EJI01_27075 | Not Available | Positive | 5616114 - 5617391 | 44462.2 |
| trap transporter substrate-binding protein | EJI01_27080 | Not Available | Positive | 5617419 - 5618438 | 37653.3 |
| sdr family nad(p)-dependent oxidoreductase | EJI01_27085 | Not Available | Positive | 5618455 - 5619234 | 27403.1 |
| glucose 1-dehydrogenase | EJI01_27090 | Not Available | Positive | 5619258 - 5620031 | 26634.4 |
| isocitrate lyase/pep mutase family protein | EJI01_27095 | Not Available | Positive | 5620031 - 5620900 | 30559.8 |
| dihydrodipicolinate synthase family protein | EJI01_27100 | Not Available | Positive | 5620945 - 5621868 | 32526.6 |
| ribokinase | EJI01_27105 | Not Available | Positive | 5621756 - 5622793 | 35302.3 |
| cystathionine beta-lyase | EJI01_27110 | Not Available | Negative | 5622849 - 5624057 | 43618.9 |
| sulfurtransferase | EJI01_27115 | Not Available | Negative | 5624074 - 5625672 | 57150.1 |
| hypothetical protein | EJI01_27120 | Not Available | Negative | 5625749 - 5626339 | 21506.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
