Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | EJI01_27025 | Not Available | Positive | 5606768 - 5608207 | 50911.0 |
| sdr family nad(p)-dependent oxidoreductase | EJI01_27030 | Not Available | Positive | 5608358 - 5608894 | 19036.1 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_27035 | Not Available | Positive | 5608915 - 5609889 | 33921.3 |
| alcohol dehydrogenase | EJI01_27040 | Not Available | Positive | 5609895 - 5610956 | 36567.8 |
| lysr family transcriptional regulator | EJI01_27045 | Not Available | Positive | 5611158 - 5612153 | 36321.9 |
| hypothetical protein | EJI01_27050 | Not Available | Negative | 5612429 - 5612917 | 17641.4 |
| hypothetical protein | EJI01_27055 | Not Available | Negative | 5612998 - 5613321 | 11866.5 |
| gntr family transcriptional regulator | EJI01_27060 | Not Available | Negative | 5613318 - 5614001 | 24719.5 |
| fad-binding oxidoreductase | EJI01_27065 | Not Available | Positive | 5614154 - 5615569 | 49909.2 |
| trap transporter small permease | EJI01_27070 | Not Available | Positive | 5615572 - 5616117 | 19885.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
