Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | EJI01_26865 | Not Available | Negative | 5566574 - 5567509 | 33273.8 |
| histone deacetylase family protein | EJI01_26870 | Not Available | Negative | 5567506 - 5568564 | 38041.1 |
| aspartate aminotransferase family protein | EJI01_26875 | Not Available | Negative | 5568561 - 5569931 | 48660.2 |
| glyoxylate/hydroxypyruvate reductase a | EJI01_26880 | Not Available | Negative | 5569957 - 5570919 | 34126.3 |
| abc transporter atp-binding protein | EJI01_26885 | Not Available | Negative | 5570919 - 5572577 | 59265.3 |
| abc transporter permease | EJI01_26890 | Not Available | Negative | 5572574 - 5573422 | 30336.9 |
| abc transporter permease | EJI01_26895 | Not Available | Negative | 5573419 - 5574390 | 34697.5 |
| abc transporter substrate-binding protein | EJI01_26900 | Not Available | Negative | 5574521 - 5576089 | 57381.1 |
| class ii aldolase/adducin family protein | EJI01_26905 | Not Available | Negative | 5576177 - 5576968 | 28788.2 |
| amino acid abc transporter substrate-binding protein | EJI01_26910 | Not Available | Positive | 5577558 - 5578751 | 44249.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
