Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_26815 | Not Available | Positive | 5554117 - 5554308 | 6793.21 |
| amino acid adenylation domain-containing protein | EJI01_26820 | Not Available | Positive | 5554385 - 5559367 | 180561.0 |
| hypothetical protein | EJI01_26825 | Not Available | Negative | 5559756 - 5559980 | 8250.82 |
| m20/m25/m40 family metallo-hydrolase | EJI01_26830 | Not Available | Positive | 5560169 - 5560667 | 17744.2 |
| m20/m25/m40 family metallo-hydrolase | EJI01_26835 | Not Available | Negative | 5560711 - 5560893 | 6255.55 |
| amidase | EJI01_26840 | Not Available | Negative | 5560967 - 5562358 | 48167.0 |
| aspartate aminotransferase family protein | EJI01_26845 | Not Available | Negative | 5562370 - 5563653 | 45807.0 |
| aminoglycoside phosphotransferase | EJI01_26850 | Not Available | Negative | 5563664 - 5564719 | 38150.8 |
| histone deacetylase family protein | EJI01_26855 | Not Available | Negative | 5564742 - 5565770 | 37193.1 |
| gntr family transcriptional regulator | EJI01_26860 | Not Available | Negative | 5565790 - 5566533 | 27023.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
