Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | EJI01_26745 | Not Available | Positive | 5542822 - 5543418 | 20759.0 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | EJI01_26750 | Not Available | Positive | 5543449 - 5544807 | 49064.0 |
| duf4390 domain-containing protein | EJI01_26755 | Not Available | Positive | 5544749 - 5545411 | 24817.8 |
| hamp domain-containing protein | EJI01_26760 | Not Available | Positive | 5545471 - 5547738 | 81125.9 |
| response regulator | EJI01_26765 | Not Available | Positive | 5547808 - 5548506 | 25191.2 |
| Trna-phe | Not Available | Not Available | Positive | 5548525 - 5548600 | Not Available |
| duf3606 domain-containing protein | EJI01_26775 | Not Available | Negative | 5548898 - 5549089 | 7031.96 |
| xre family transcriptional regulator | EJI01_26780 | Not Available | Negative | 5549258 - 5549677 | 15085.2 |
| duf3606 domain-containing protein | EJI01_26785 | Not Available | Negative | 5550201 - 5550380 | 6650.75 |
| hypothetical protein | EJI01_26810 | Not Available | Negative | 5553404 - 5553619 | 8290.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
