Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase ib | EJI01_26695 | Not Available | Positive | 5529253 - 5530304 | 39759.6 |
| Trna-trp | Not Available | Not Available | Positive | 5530320 - 5530395 | Not Available |
| preprotein translocase subunit sece | EJI01_26705 | Not Available | Positive | 5530540 - 5530923 | 14058.3 |
| transcription termination/antitermination protein nusg | EJI01_26710 | Not Available | Positive | 5530923 - 5531519 | 22516.9 |
| 50s ribosomal protein l11 | EJI01_26715 | Not Available | Positive | 5531660 - 5532091 | 15089.8 |
| 50s ribosomal protein l1 | EJI01_26720 | Not Available | Positive | 5532092 - 5532793 | 24018.5 |
| 50s ribosomal protein l10 | EJI01_26725 | Not Available | Positive | 5533032 - 5533565 | 18448.3 |
| 50s ribosomal protein l7/l12 | EJI01_26730 | Not Available | Positive | 5533604 - 5533981 | 12738.4 |
| dna-directed rna polymerase subunit beta | EJI01_26735 | Not Available | Positive | 5534317 - 5538441 | 152703.0 |
| dna-directed rna polymerase subunit beta' | EJI01_26740 | Not Available | Positive | 5538517 - 5542749 | 154830.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
