Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1c | EJI01_26645 | Not Available | Positive | 5516374 - 5518554 | 78592.8 |
| arylmalonate decarboxylase | EJI01_26650 | Not Available | Positive | 5518611 - 5519348 | 25634.2 |
| lysr family transcriptional regulator | EJI01_26655 | Not Available | Positive | 5519332 - 5520219 | 31285.4 |
| mandelate racemase/muconate lactonizing enzyme family protein | EJI01_26660 | Not Available | Positive | 5520336 - 5521490 | 41675.9 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_26665 | Not Available | Positive | 5521680 - 5522663 | 33445.9 |
| alpha-hydroxy-acid oxidizing protein | EJI01_26670 | Not Available | Positive | 5522660 - 5523796 | 41791.0 |
| pas domain s-box protein | EJI01_26675 | Not Available | Positive | 5523989 - 5525827 | 67358.7 |
| alpha-hydroxy-acid oxidizing protein | EJI01_26680 | Not Available | Positive | 5526025 - 5527182 | 42184.9 |
| hypothetical protein | EJI01_26685 | Not Available | Negative | 5527184 - 5527744 | 21174.7 |
| dna polymerase iv | EJI01_26690 | Not Available | Positive | 5527852 - 5529054 | 43994.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
