Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EJI01_02605 | Not Available | Negative | 552336 - 553328 | 35584.4 |
| cobalamin biosynthesis protein cobd | EJI01_02610 | Not Available | Negative | 553325 - 554347 | 35786.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EJI01_02615 | Not Available | Negative | 554506 - 555075 | 21071.5 |
| abc transporter atp-binding protein | EJI01_02620 | Not Available | Negative | 555097 - 555885 | 28057.9 |
| iron abc transporter permease | EJI01_02625 | Not Available | Negative | 555885 - 556844 | 31939.4 |
| abc transporter substrate-binding protein | EJI01_02630 | Not Available | Negative | 556886 - 557746 | 30712.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | EJI01_02635 | Not Available | Negative | 557743 - 558315 | 20576.3 |
| tonb-dependent receptor | EJI01_02640 | Not Available | Negative | 558312 - 560084 | 64917.7 |
| duf904 domain-containing protein | EJI01_02645 | Not Available | Positive | 560777 - 561001 | 8325.99 |
| cell division protein zapa | EJI01_02650 | Not Available | Positive | 561001 - 561336 | 11605.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
