Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dehydroadipyl-coa semialdehyde dehydrogenase | EJI01_26495 | Not Available | Positive | 5489202 - 5490761 | 53472.9 |
| benzoate-coa ligase family protein | EJI01_26500 | Not Available | Positive | 5490798 - 5492348 | 56036.8 |
| alpha/beta hydrolase | EJI01_26505 | Not Available | Positive | 5492464 - 5493267 | 30309.9 |
| abc transporter permease | EJI01_26510 | Not Available | Positive | 5493264 - 5494433 | 40986.3 |
| branched-chain amino acid abc transporter permease | EJI01_26515 | Not Available | Positive | 5494580 - 5495452 | 31392.7 |
| branched-chain amino acid abc transporter permease | EJI01_26520 | Not Available | Positive | 5495454 - 5496407 | 33220.9 |
| abc transporter atp-binding protein | EJI01_26525 | Not Available | Positive | 5496404 - 5497150 | 26426.8 |
| abc transporter atp-binding protein | EJI01_26530 | Not Available | Positive | 5497150 - 5497851 | 25339.0 |
| hypothetical protein | EJI01_26535 | Not Available | Negative | 5498165 - 5498469 | 10235.7 |
| hypothetical protein | EJI01_26540 | Not Available | Negative | 5498509 - 5499135 | 20072.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
