Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | EJI01_26445 | Not Available | Negative | 5479368 - 5479928 | 20466.7 |
| duf1326 domain-containing protein | EJI01_26450 | Not Available | Positive | 5480108 - 5480710 | 21245.1 |
| duf2182 domain-containing protein | EJI01_26455 | Not Available | Positive | 5480742 - 5481557 | 28903.0 |
| dmt family transporter | EJI01_26460 | Not Available | Positive | 5481550 - 5482434 | 29757.1 |
| maoc family dehydratase | EJI01_26465 | Not Available | Negative | 5482418 - 5482855 | 16124.3 |
| benzoyl-coa 2,3-epoxidase subunit boxa | EJI01_26470 | Not Available | Negative | 5482865 - 5484145 | 46672.5 |
| benzoyl-coa 2,3-epoxidase subunit boxb | EJI01_26475 | Not Available | Negative | 5484269 - 5485696 | 53895.7 |
| benzoyl-coa-dihydrodiol lyase | EJI01_26480 | Not Available | Negative | 5485726 - 5487396 | 60827.1 |
| helix-turn-helix domain-containing protein | EJI01_26485 | Not Available | Negative | 5487531 - 5488460 | 33564.1 |
| duf4863 family protein | EJI01_26490 | Not Available | Positive | 5488616 - 5489080 | 16850.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
