Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa transferase | EJI01_26345 | Not Available | Positive | 5459780 - 5460997 | 44629.9 |
| maoc family dehydratase | EJI01_26350 | Not Available | Positive | 5460985 - 5461506 | 19324.2 |
| maoc family dehydratase | EJI01_26355 | Not Available | Positive | 5461503 - 5461955 | 16711.1 |
| iclr family transcriptional regulator | EJI01_26360 | Not Available | Negative | 5461971 - 5462768 | 28464.6 |
| hypothetical protein | EJI01_26365 | Not Available | Positive | 5463307 - 5463924 | 22924.3 |
| duf4304 domain-containing protein | EJI01_26370 | Not Available | Positive | 5463970 - 5464458 | 18116.0 |
| lysr family transcriptional regulator | EJI01_26375 | Not Available | Negative | 5464524 - 5465498 | 35533.0 |
| cytoplasmic protein | EJI01_26380 | Not Available | Positive | 5465570 - 5465914 | 12793.1 |
| hypothetical protein | EJI01_26385 | Not Available | Negative | 5465932 - 5467386 | 53815.8 |
| rrf2 family transcriptional regulator | EJI01_26390 | Not Available | Positive | 5467337 - 5467798 | 16177.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
