Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase | EJI01_26245 | Not Available | Negative | 5435800 - 5436984 | 41103.5 |
| indolepyruvate ferredoxin oxidoreductase family protein | EJI01_26250 | Not Available | Negative | 5436981 - 5440529 | 127269.0 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_26255 | Not Available | Negative | 5440526 - 5441515 | 34856.4 |
| lysr family transcriptional regulator | EJI01_26260 | Not Available | Negative | 5441642 - 5442529 | 32180.0 |
| crp/fnr family transcriptional regulator | EJI01_26265 | Not Available | Negative | 5442581 - 5443300 | 26952.4 |
| 3-isopropylmalate dehydratase | EJI01_26270 | Not Available | Negative | 5443322 - 5445286 | 70488.0 |
| ribonuclease e inhibitor rraa | EJI01_26275 | Not Available | Positive | 5445409 - 5445942 | 18749.5 |
| lysr family transcriptional regulator | EJI01_26280 | Not Available | Positive | 5446159 - 5447121 | 34682.7 |
| hypothetical protein | EJI01_26285 | Not Available | Negative | 5447142 - 5448110 | 35456.3 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_26290 | Not Available | Positive | 5448265 - 5449278 | 35381.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
