Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | EJI01_02555 | Not Available | Negative | 539957 - 540511 | 20103.8 |
| adenosylcobinamide-gdp ribazoletransferase | EJI01_02560 | Not Available | Negative | 540508 - 541302 | 26634.2 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | EJI01_02565 | Not Available | Negative | 541299 - 542342 | 35878.7 |
| cobyric acid synthase | EJI01_02570 | Not Available | Negative | 542339 - 543769 | 50480.5 |
| hypothetical protein | EJI01_02575 | Not Available | Positive | 543955 - 544188 | 8170.71 |
| efflux transporter outer membrane subunit | EJI01_02580 | Not Available | Negative | 544190 - 545674 | 52987.3 |
| multidrug efflux rnd transporter permease subunit | EJI01_02585 | Not Available | Negative | 545687 - 548956 | 116696.0 |
| efflux rnd transporter periplasmic adaptor subunit | EJI01_02590 | Not Available | Negative | 548986 - 550230 | 43817.3 |
| alpha/beta hydrolase | EJI01_02595 | Not Available | Negative | 550375 - 551247 | 30512.7 |
| lysr family transcriptional regulator | EJI01_02600 | Not Available | Positive | 551417 - 552331 | 33945.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
