Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | EJI01_26080 | Not Available | Negative | 5403017 - 5403766 | 27901.3 |
| phospholipase c, phosphocholine-specific | EJI01_26085 | Not Available | Negative | 5403832 - 5406033 | 81354.4 |
| hypothetical protein | EJI01_26090 | Not Available | Negative | 5406064 - 5406246 | 5707.57 |
| alpha/beta fold hydrolase | EJI01_26095 | Not Available | Positive | 5406409 - 5407206 | 28418.2 |
| hypothetical protein | EJI01_26100 | Not Available | Negative | 5407659 - 5409866 | 77340.3 |
| alpha/beta fold hydrolase | EJI01_26105 | Not Available | Negative | 5409920 - 5410804 | 31842.4 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_26110 | Not Available | Negative | 5410838 - 5411815 | 34042.2 |
| lysr family transcriptional regulator | EJI01_26115 | Not Available | Positive | 5411934 - 5412917 | 35869.5 |
| glycosyl transferase | EJI01_26130 | Not Available | Negative | 5413422 - 5414591 | 45196.5 |
| hypothetical protein | EJI01_26135 | Not Available | Negative | 5414645 - 5415490 | 32164.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
