Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein 3 | EJI01_26030 | Not Available | Positive | 5394795 - 5396006 | 41872.8 |
| lysr family transcriptional regulator | EJI01_26035 | Not Available | Negative | 5395993 - 5396979 | 36911.8 |
| duf1161 domain-containing protein | EJI01_26040 | Not Available | Negative | 5397152 - 5397514 | 12234.5 |
| hypothetical protein | EJI01_26045 | Not Available | Negative | 5397561 - 5397947 | 12940.3 |
| hypothetical protein | EJI01_26050 | Not Available | Negative | 5398203 - 5398595 | 14772.2 |
| hypothetical protein | EJI01_26055 | Not Available | Positive | 5398808 - 5399104 | 10855.9 |
| tetratricopeptide repeat protein | EJI01_26060 | Not Available | Positive | 5399095 - 5399658 | 21355.8 |
| duf4212 domain-containing protein | EJI01_26065 | Not Available | Positive | 5399689 - 5399946 | 10193.3 |
| cation acetate symporter | EJI01_26070 | Not Available | Positive | 5399948 - 5402059 | 75576.7 |
| duf899 domain-containing protein | EJI01_26075 | Not Available | Positive | 5402230 - 5402979 | 28506.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
