Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EJI01_25760 | Not Available | Negative | 5331831 - 5332823 | 35736.3 |
| creatininase family protein | EJI01_25765 | Not Available | Negative | 5332887 - 5333750 | 31199.3 |
| rida family protein | EJI01_25770 | Not Available | Negative | 5333802 - 5334272 | 17055.5 |
| amidohydrolase | EJI01_25775 | Not Available | Negative | 5334269 - 5335603 | 48235.6 |
| flavodoxin family protein | EJI01_25780 | Not Available | Negative | 5335613 - 5336200 | 22125.0 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EJI01_25785 | Not Available | Negative | 5336224 - 5336526 | 10689.8 |
| tetr family transcriptional regulator | EJI01_25790 | Not Available | Negative | 5336702 - 5337358 | 24251.3 |
| hypothetical protein | EJI01_25795 | Not Available | Positive | 5337606 - 5337869 | 9026.95 |
| vapc toxin family pin domain ribonuclease | EJI01_25810 | Not Available | Negative | 5339193 - 5339576 | 14137.5 |
| type ii toxin-antitoxin system vapb family antitoxin | EJI01_25815 | Not Available | Negative | 5339576 - 5339788 | 7771.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
