Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | EJI01_25700 | Not Available | Negative | 5325404 - 5325715 | 11949.3 |
| hypothetical protein | EJI01_25705 | Not Available | Negative | 5325712 - 5326011 | 11241.4 |
| type ii toxin-antitoxin system pard family antitoxin | EJI01_25710 | Not Available | Positive | 5326250 - 5326501 | 9416.28 |
| type ii toxin-antitoxin system rele/pare family toxin | EJI01_25715 | Not Available | Positive | 5326522 - 5326824 | 11538.8 |
| hypothetical protein | EJI01_25730 | Not Available | Negative | 5327622 - 5328167 | 19464.2 |
| helix-turn-helix domain-containing protein | EJI01_25735 | Not Available | Negative | 5328164 - 5328373 | 7318.83 |
| trap transporter large permease subunit | EJI01_25740 | Not Available | Positive | 5328320 - 5329165 | 29633.5 |
| fad-binding oxidoreductase | EJI01_25745 | Not Available | Negative | 5328632 - 5330008 | 49830.9 |
| abc transporter permease | EJI01_25750 | Not Available | Negative | 5330099 - 5330884 | 27967.4 |
| abc transporter atp-binding protein | EJI01_25755 | Not Available | Negative | 5330992 - 5331828 | 30150.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
