Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | EJI01_00205 | Not Available | Negative | 45600 - 47186 | 57425.7 |
| hydroxyacylglutathione hydrolase | EJI01_00210 | Not Available | Negative | 47183 - 47980 | 28241.6 |
| class i sam-dependent methyltransferase | EJI01_00215 | Not Available | Positive | 48000 - 48767 | 29273.1 |
| ribonuclease hi | EJI01_00220 | Not Available | Positive | 48764 - 49213 | 16723.1 |
| cyclic nucleotide-binding domain-containing protein | EJI01_00225 | Not Available | Negative | 49210 - 49716 | 18868.0 |
| molybdopterin molybdenumtransferase moea | EJI01_00230 | Not Available | Negative | 49735 - 51048 | 45774.8 |
| molybdenum cofactor guanylyltransferase moba | EJI01_00235 | Not Available | Negative | 51045 - 51689 | 22813.4 |
| gtp 3',8-cyclase moaa | EJI01_00240 | Not Available | Negative | 51686 - 52801 | 40572.9 |
| class a beta-lactamase-related serine hydrolase | EJI01_00245 | Not Available | Negative | 52849 - 54135 | 46352.9 |
| sdr family oxidoreductase | EJI01_00250 | Not Available | Negative | 54208 - 54969 | 26562.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
