Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | EJI01_25540 | Not Available | Positive | 5297087 - 5297914 | 29957.3 |
| hypothetical protein | EJI01_25545 | Not Available | Positive | 5297961 - 5298824 | 31403.4 |
| efflux transporter outer membrane subunit | EJI01_25550 | Not Available | Positive | 5298850 - 5300409 | 56260.6 |
| mfs transporter | EJI01_25555 | Not Available | Positive | 5300484 - 5301989 | 54038.5 |
| hlyd family secretion protein | EJI01_25560 | Not Available | Positive | 5301996 - 5303054 | 36649.9 |
| hypothetical protein | EJI01_25565 | Not Available | Positive | 5303071 - 5303709 | 22662.0 |
| tetr family transcriptional regulator | EJI01_25570 | Not Available | Positive | 5303690 - 5304907 | 45391.5 |
| hydrolase | EJI01_25575 | Not Available | Negative | 5304876 - 5305529 | 23342.1 |
| lysr family transcriptional regulator | EJI01_25580 | Not Available | Positive | 5305679 - 5306575 | 32057.7 |
| duf2892 domain-containing protein | EJI01_25585 | Not Available | Positive | 5306784 - 5306990 | 7418.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
