Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_25485 | Not Available | Positive | 5283249 - 5283527 | 10166.2 |
| ahpc/tsa family protein | EJI01_25490 | Not Available | Positive | 5283531 - 5284124 | 21365.3 |
| carboxymuconolactone decarboxylase family protein | EJI01_25495 | Not Available | Positive | 5284296 - 5284775 | 18138.9 |
| carboxymuconolactone decarboxylase family protein | EJI01_25505 | Not Available | Positive | 5285209 - 5285688 | 18048.8 |
| cytochrome bc complex cytochrome b subunit | EJI01_25510 | Not Available | Positive | 5285739 - 5287112 | 51483.6 |
| hypothetical protein | EJI01_25515 | Not Available | Positive | 5287212 - 5287436 | 8221.82 |
| response regulator | EJI01_25520 | Not Available | Positive | 5288181 - 5288918 | 27421.2 |
| lysr family transcriptional regulator | EJI01_25525 | Not Available | Positive | 5289140 - 5290144 | 37011.6 |
| response regulator | EJI01_25530 | Not Available | Negative | 5290315 - 5290743 | 15298.4 |
| response regulator | EJI01_25535 | Not Available | Negative | 5290831 - 5296359 | 202567.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
