Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | EJI01_25375 | Not Available | Negative | 5264140 - 5265096 | 33599.6 |
| c-type cytochrome | EJI01_25380 | Not Available | Negative | 5265311 - 5266594 | 43996.9 |
| rna polymerase sigma factor | EJI01_25385 | Not Available | Negative | 5266629 - 5267333 | 25426.5 |
| class i sam-dependent methyltransferase | EJI01_25390 | Not Available | Positive | 5267457 - 5268251 | 28724.2 |
| hypothetical protein | EJI01_25395 | Not Available | Positive | 5268503 - 5268703 | 7293.23 |
| crp/fnr family transcriptional regulator | EJI01_25400 | Not Available | Positive | 5269325 - 5270038 | 26533.3 |
| hypothetical protein | EJI01_25405 | Not Available | Positive | 5270224 - 5270583 | 12589.2 |
| hypothetical protein | EJI01_25410 | Not Available | Negative | 5270658 - 5272373 | 61544.7 |
| twin-arginine translocation pathway signal | EJI01_25420 | Not Available | Positive | 5274447 - 5275031 | 19881.5 |
| hemerythrin domain-containing protein | EJI01_25425 | Not Available | Positive | 5275125 - 5275595 | 18062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
