Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_25225 | Not Available | Positive | 5235947 - 5236390 | 15795.8 |
| hypothetical protein | EJI01_25230 | Not Available | Negative | 5236415 - 5237125 | 25744.2 |
| lysr family transcriptional regulator | EJI01_25235 | Not Available | Positive | 5237294 - 5238244 | 34957.2 |
| hydroxyquinol 1,2-dioxygenase | EJI01_25240 | Not Available | Positive | 5238622 - 5239134 | 19032.7 |
| hydroxyquinol 1,2-dioxygenase | EJI01_25245 | Not Available | Positive | 5239155 - 5240162 | 37837.5 |
| fad-dependent oxidoreductase | EJI01_25250 | Not Available | Positive | 5240218 - 5241960 | 61518.9 |
| c-type cytochrome | EJI01_25255 | Not Available | Positive | 5241957 - 5242319 | 13036.7 |
| nuclear transport factor 2 family protein | EJI01_25260 | Not Available | Positive | 5242336 - 5242806 | 17427.3 |
| aldehyde dehydrogenase family protein | EJI01_25265 | Not Available | Positive | 5242853 - 5244316 | 52519.8 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_25270 | Not Available | Positive | 5244342 - 5245316 | 34515.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
