Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c4 | EJI01_25175 | Not Available | Positive | 5225239 - 5225922 | 24336.0 |
| protocatechuate 3,4-dioxygenase subunit alpha | EJI01_25180 | Not Available | Negative | 5225977 - 5226582 | 21787.6 |
| protocatechuate 3,4-dioxygenase subunit beta | EJI01_25185 | Not Available | Negative | 5226599 - 5227300 | 26422.3 |
| lysr family transcriptional regulator | EJI01_25190 | Not Available | Positive | 5227401 - 5228369 | 34115.5 |
| duf1841 family protein | EJI01_25195 | Not Available | Negative | 5228345 - 5228779 | 16413.3 |
| adenylate/guanylate cyclase domain-containing protein | EJI01_25200 | Not Available | Positive | 5228849 - 5232019 | 113695.0 |
| redoxin domain-containing protein | EJI01_25205 | Not Available | Positive | 5232042 - 5232695 | 23845.0 |
| adenylate/guanylate cyclase domain-containing response regulator | EJI01_25210 | Not Available | Negative | 5232708 - 5233832 | 40900.6 |
| hamp domain-containing protein | EJI01_25215 | Not Available | Positive | 5233977 - 5235554 | 58080.0 |
| response regulator | EJI01_25220 | Not Available | Positive | 5235551 - 5235925 | 13739.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
