Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2917 domain-containing protein | EJI01_25115 | Not Available | Positive | 5215566 - 5215868 | 11000.3 |
| lysr family transcriptional regulator | EJI01_25120 | Not Available | Positive | 5215861 - 5216760 | 33208.4 |
| hypothetical protein | EJI01_25125 | Not Available | Negative | 5216843 - 5217955 | 39266.2 |
| hypothetical protein | EJI01_25130 | Not Available | Negative | 5218611 - 5218817 | 6793.28 |
| alpha/beta hydrolase | EJI01_25140 | Not Available | Positive | 5219264 - 5220151 | 32288.8 |
| tetratricopeptide repeat protein | EJI01_25145 | Not Available | Positive | 5220168 - 5221484 | 47546.2 |
| vwa domain-containing protein | EJI01_25155 | Not Available | Negative | 5222199 - 5223386 | 46099.8 |
| n-acetyltransferase | EJI01_25160 | Not Available | Negative | 5223393 - 5224001 | 22657.2 |
| hypothetical protein | EJI01_25165 | Not Available | Negative | 5224003 - 5224251 | 8535.48 |
| moxr family atpase | EJI01_25170 | Not Available | Negative | 5224248 - 5225090 | 32089.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
