Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4259 domain-containing protein | EJI01_25065 | Not Available | Positive | 5205765 - 5206226 | 16153.0 |
| hypothetical protein | EJI01_25070 | Not Available | Positive | 5206354 - 5207103 | 26249.5 |
| feruloyl-coa synthase | EJI01_25075 | Not Available | Negative | 5207110 - 5208918 | 65530.6 |
| 3-hydroxyacyl-coa dehydrogenase | EJI01_25080 | Not Available | Negative | 5208963 - 5209916 | 33779.5 |
| twin-arginine translocation pathway signal protein | EJI01_25085 | Not Available | Negative | 5209920 - 5210912 | 34181.1 |
| 3-keto-5-aminohexanoate cleavage protein | EJI01_25090 | Not Available | Negative | 5210948 - 5211865 | 33359.4 |
| crp/fnr family transcriptional regulator | EJI01_25095 | Not Available | Positive | 5211977 - 5212687 | 26458.7 |
| hypothetical protein | EJI01_25100 | Not Available | Negative | 5212691 - 5212972 | 10258.9 |
| helix-turn-helix domain-containing protein | EJI01_25105 | Not Available | Negative | 5213089 - 5214138 | 37920.8 |
| tetratricopeptide repeat protein | EJI01_25110 | Not Available | Positive | 5214308 - 5215636 | 46932.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
