Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase rimo | EJI01_02455 | Not Available | Negative | 518887 - 520293 | 50679.4 |
| polyhydroxyalkanoate synthesis repressor phar | EJI01_02460 | Not Available | Negative | 520333 - 520908 | 21662.5 |
| hypothetical protein | EJI01_02465 | Not Available | Negative | 520967 - 521335 | 13418.8 |
| Trna-val | Not Available | Not Available | Positive | 521507 - 521583 | Not Available |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | EJI01_02475 | Not Available | Negative | 521635 - 523866 | 81308.3 |
| 3-hydroxybutyrate dehydrogenase | EJI01_02480 | Not Available | Positive | 523982 - 524752 | 26996.4 |
| duf541 domain-containing protein | EJI01_02485 | Not Available | Negative | 524767 - 525438 | 23562.2 |
| hypothetical protein | EJI01_02490 | Not Available | Negative | 525543 - 525893 | 12918.3 |
| two-component system response regulator ompr | EJI01_02495 | Not Available | Positive | 526066 - 526797 | 27206.8 |
| hamp domain-containing protein | EJI01_02500 | Not Available | Positive | 526880 - 528280 | 51750.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
