Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hotdog fold thioesterase | EJI01_25015 | Not Available | Negative | 5195350 - 5195766 | 15070.1 |
| hypothetical protein | EJI01_25020 | Not Available | Positive | 5195871 - 5197178 | 46729.1 |
| lysr family transcriptional regulator | EJI01_25025 | Not Available | Negative | 5197182 - 5198099 | 33016.5 |
| aspartate aminotransferase family protein | EJI01_25030 | Not Available | Positive | 5198172 - 5199569 | 49550.6 |
| twin-arginine translocation pathway signal | EJI01_25035 | Not Available | Positive | 5199600 - 5200580 | 34235.6 |
| lamg domain-containing protein | EJI01_25040 | Not Available | Positive | 5200577 - 5202865 | 83451.6 |
| threo-3-hydroxy-l-aspartate ammonia-lyase | EJI01_25045 | Not Available | Negative | 5202882 - 5203853 | 34650.5 |
| transcriptional regulator | EJI01_25050 | Not Available | Negative | 5203898 - 5204218 | 11941.6 |
| carboxymuconolactone decarboxylase | EJI01_25055 | Not Available | Positive | 5204319 - 5204882 | 20739.3 |
| hypothetical protein | EJI01_25060 | Not Available | Positive | 5204969 - 5205721 | 27369.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
