Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase family protein | EJI01_24910 | Not Available | Positive | 5178025 - 5178918 | 32623.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | EJI01_24915 | Not Available | Positive | 5179043 - 5180992 | 71382.1 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | EJI01_24920 | Not Available | Positive | 5180989 - 5181627 | 22790.9 |
| lysine transporter lyse | EJI01_24925 | Not Available | Positive | 5181688 - 5182302 | 21713.5 |
| serine hydrolase family protein | EJI01_24935 | Not Available | Positive | 5183201 - 5183743 | 20127.8 |
| parb/repb/spo0j family partition protein | EJI01_24940 | Not Available | Positive | 5183749 - 5184690 | 33723.6 |
| peptidoglycan-binding protein | EJI01_24945 | Not Available | Positive | 5184807 - 5185709 | 30340.0 |
| fad-binding protein | EJI01_24950 | Not Available | Negative | 5185773 - 5187197 | 50392.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EJI01_24955 | Not Available | Positive | 5187256 - 5187828 | 20636.7 |
| hypothetical protein | EJI01_24960 | Not Available | Positive | 5187897 - 5188208 | 10361.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
